GSE36552

Tracing pluripotency of human early embryos and embryonic stem cells by single cell RNA-seq

23934149

2013

Oocyte [3]

Zygote [3]

2-cell [6]

4-cell [12]

8-cell [20]

Morula (16-cell)[16]

human stem cells (hESC) [10]

GPL11154

Illumina HiSeq2000 seq

GSE44183

Genetic Programs in Human and Mouse Early Embryos Revealed by Single-Cell

RNA-Sequencing

23892778

2013

Oocyte[3]

Zygote[2]

2-cell [3]

4-cell [4]

8-cell [10]

Morula (16-cell) [3]

GPL11154

GPL13112

Illumina HiSeq2000 seq

GSE71318

Tracing the expression of circular RNAs in human preimplantation embryos

27315811

2016

Oocyte[4]

Zygote[5]

2-cell[4]

4-cell[4]

8-cell[5]

Morula (16-cell) [4]

Blastocyst [9]

human stem cells (hESC) [7]

GPL16791

SUPeR-seq

GSE65481

Human Embryo Single Cell Transcriptome Analysis

26904963

2015

zygote (2PN)-bad[11]

zygote (2PN)-good[11]

GPL11154

Illumina HiSeq 2000 seq

GSE86982

REGION-SPECIFIC NEURAL STEM CELL LINEAGES REVEALED BY SINGLE-CELL RNA-SEQ FROM HUMAN EMBRYONIC STEM CELLS

28094016

2016

Neural_D12 [170]

Neural_D26 [693]

Neural_D54 [864]

Neural_D80 [345]

GPL16791

Smart-Seq2

GSE103723

Single cell RNA-seq analysis of human embryonic cortex

29867213

2018

Occipital Lobe [192]

Inferior Surface [552]

Parietal Lobe [648]

Temporal Lobe [752]

Frontal Lobe [1480]

GPL20301

STRT-seq

GSE95630

Tracing the temporal-spatial transcriptomic landscapes of the human fetal digestive tract by single cell RNA-seq analysis

29802404

2018

Esophagus [ 1352]

Stomach [1488]

Small intestine (SI) [1648]

Large intestine [1498]

GPL20301

STRT-seq

GSE64016

Single cell RNA-seq data of human hESCs to evaluate SCnorm: robust normalization of single-cell rna-seq data

28418000

2017

H9 hESC line [184]

H1 hESC line [184]

GPL16791

Smart-Seq2

GSE94820

Single-cell RNA-seq reveals new types of human blood dendritic cells, monocytes and progenitors

28428369

2017

Mono1 [124]

Mono2 [124]

Mono3 [124]

CD141 [192]

DoubleNeg [192]

CD1C [192]

pDC [192]

GPL15520

GPL16791

Smart-Seq2

GSE106118

Single-Cell Transcriptome Analysis Maps the Developmental Track of the Human Heart

30759401

2019

Right Ventricle [980]

Left Atrium [981]

Left Ventricle [986]

Right Atrium [986]

Valve [1104]

GPL20301

STRT-seq